11/5/2024

speaker
Operator

Good morning and welcome to the BEAMS Therapeutics Conference Call. At this time, all participants are in a listen-only mode. There will be a question and answer session at the end. Please be advised that this call is being recorded at BEAMS request. I would now like to turn the call over to Holly Manning, Vice President of Investor Relations and External Communications.

speaker
spk07

Thank you, operator. Good morning everyone and welcome to BEAMS Conference Call to review third quarter 2024 business updates, including abstract acceptance for presentation at the American Society's Hematology Annual Meeting. You can access slides for today's call by going to the Investor section of our website, bmtx.com. With me on the call today with prepared remarks are John Evans, our Chief Executive Officer, Dr. Giuseppe Pinot-Cheramella, our President, and Dr. Amy Simon, our Chief Medical Officer. Before we get started, I would like to remind everyone that some of the statements we make on this call will include forward-looking statements for purposes of the Safe Harbor provisions under the Private Securities Litigation Reform Act of 1995. Actual events and results could differ materially from those expressed or implied by any forward-looking statements as a result of various risks, uncertainties, and other factors, including those set forth in the risk factor section of our most recent annual report on Form 10-K, as updated by our quarterly report on Form 10-Q and any other filings that we may make with the FCC. In addition, any forward-looking statements represent our views only as of today and should not be relied upon as representing our views as of any subsequent date. Access as required by law being specifically displaying any obligation to update or revise any forward-looking statements, even if our views change. With that, I will turn the call over to John.

speaker
John

Thanks, Holly. Good morning, everyone, and thank you for joining us for this exciting moment for BEAM, for our employees, and for the patients we aim to serve. At BEAM, our vision is to provide lifelong cures for patients suffering from serious diseases. This vision has never felt more tangible than it does today as we report the first clinical data from our portfolio of one-time treatments. From the beginning of BEAM, we saw an opportunity to advance the gene editing field. CRISPR nucleases are able to precisely target a location in the DNA, but they lack the ability to precisely edit genes. With our innovative next-generation technology called base editing, we can now make more precise single-base changes at specific locations in genes, resulting in predictable edits in all cells without needing to damage or make double-stranded breaks in the DNA. The central hypothesis behind BEAM is that this breakthrough could provide a superior way to modify genes and could open up entirely new applications in gene editing for a wide range of severe diseases. Given the incredible breadth of potential applications for base editing, it was critical to sharpen our focus and execution on areas where we can have the greatest impact in the near term. This led to our two core franchises in hematology and liver genetic diseases. In both cases, we are advancing highly differentiated and potentially -in-class lead programs with BEAM 101 in sickle cell disease and BEAM 302 in alpha-1 antitrypsin deficiency, or AATB, each of which have increased probability of technical success based on strong preclinical validation as well as recent advances in the field. In sickle cell disease, we have a validated regulatory pathway available for BEAM 101, which the BEACON trial is designed to pursue. We also have a next-generation program using our ESCAPE technology designed to expand the addressable patient population by eliminating chemotherapy from transplanting. Beginning today and continuing at ASH, we are reporting the first clinical data from our hematology franchise. Initial data from our BEACON Phase 1-2 trial support the potential for meaningful clinical differentiation of BEAM 101 compared to currently available treatments for sickle cell disease. We will also be reporting non-human primate data for our ESCAPE technology that validate our vision of enabling gene editing and stem cell transplant using only antibody-based conditioning, avoiding chemotherapy altogether. In our liver franchise, BEAM 302 also has the potential for rapid proof of concept in the clinic and represents the first program with potential to be a one-time treatment with benefit for both lung and liver manifestations of the disease. We expect to report the first clinical data from our ongoing Phase 1-2 trial of BEAM 302 in patients with AATD in 2025, marking another potentially transformative event for the company, our platform, and for patients. I'd like to highlight several important updates from our third quarter financial results press release. To date, we have exceeded enrollment expectations in the BEACON trial with 35 sickle cell patients enrolled. Of these, eight patients have been treated with BEAM 101, with the remainder going through pre-transplant stages including cell collection and drug product manufacturing. We are also excited to share that we have nominated developing candidates for our ESCAPE technology, which Pino will detail shortly. For our in-vivo therapies, this summer we dosed the first patient with BEAM 302 in AATD and have continued to enroll and treat patients while opening new sites globally. As of last month, we have completed dosing in the first cohort of the study, and as I noted, we expect to share initial data from multiple cohorts in 2025. In addition, in June, we received U.S. IND clearance for our second in-vivo program, BEAM 301, for the treatment of glycogen storage disease 1A, or GSD 1A. Since then, our team has been preparing to advance BEAM 301 into the clinic with site activation underway and patient dosing expected to commence in early 2025. And importantly, we continue to be in a strong financial position. Turning now to Ash, we are honored to have four abstracts accepted for presentation at the meeting in December. These include two oral presentations, one featuring initial clinical data from the BEACON trial and one with our non-human primate data for our ESCAPE technology, as well as poster presentations showcasing exploratory biomarker data for BEAM 101 and preliminary clinical data for BEAM 201, our quad-edited CAR T-cell for T-cell malignancies. Abstracts will be available on the Ash website at 9 a.m. Eastern today. I'll now turn to sickle cell disease. At the J.T. Morgan conference in January, I asked the question, what if we could develop better one-time therapies for people living with sickle cell disease? I'm pleased today to report that, yes, we believe we are on the road to do just that. For sickle cell disease, we are pursuing a long-term, staged development strategy that envisions three waves of innovation to progressively reach broader subsets of patients over time. Our wave one approach is BEAM 101, a genetically modified investigational cell therapy administered via hematopoietic stem cell transplantation with B-cell fin conditioning. We believe BEAM 101 has the potential to be a -in-class option for the roughly 10% of sickle cell patients who have severe disease despite receiving standard of care treatments and are considered appropriate for a chemotherapy-based transplant. So the market for autologous genetic therapies in sickle cell disease is just getting started. It is important to note that allogeneic transplants for patients with severe sickle cell disease are already a reality, with several hundred conducted annually in the U.S. And that number only represents those patients who could find a suitable matched donor, which we know represents a small minority of total eligible patients. And finally, we know that autologous transplants are expected to have real advantages over allogeneic transplants, including a lack of -versus-host disease and no need to coordinate the procedure with a donor. Wave two takes the same BEAM 101 platform and now incorporates our ESCAPE technology to enable non-genotoxic conditioning. If successful, ESCAPE would eliminate chemotherapy, which we believe is one of the main hurdles for patients considering a transplant-based therapy and thus meaningfully expand the patient population for ex vivo gene editing by three to four-fold. A little further out is wave three, where we are using our leading capabilities in lipid nanoparticles to explore the potential for in vivo-based editing for sickle cell disease, which would eliminate the need for transplantation, thus enabling even broader patient access around the world. Now let's start by reviewing BEAM 101. Sickle cell disease is a genetic disorder that affects hemoglobin, which delivers oxygen to cells throughout the body. People with this disease make abnormal hemoglobin molecules called hemoglobin S, or HBS. This abnormal HBS can form stiff polymers, which distort red blood cells into a sickle or crescent shape, blocking the flow of blood and oxygen throughout the body. Sickle cell disease begins in early childhood and leads to anemia, infections, and episodes of severe pain, which can manifest as vaso-occlusive crises, or VOCs. Patients also can experience life-threatening complications, such as stroke and significant organ damage, resulting in decreased life expectancy. While recently approved gene therapies have been shown to significantly reduce VOCs, patients are now testing their opportunities for further improvement. Elevating a protective form of hemoglobin called fetal hemoglobin, or HBS, is a clinically validated strategy to prevent the consequences of sickle cell disease by preventing HBS from polymerizing, thereby preventing red blood cell destruction and organ damage. BEAM 101 was designed to induce a more efficient editing, leading to greater and more uniform reduction of HBS, a deeper reduction of HBS, and normalization of hemoglobin and red blood cell function. What would an ideal outcome from genetic correction look like? As shown on slide 13, total hemoglobin for a person with sickle cell disease has 100% HBS in circulation, which causes sickling and results in decreased red blood cell lifespan, anemia, pain crises, and organ damage. The disease threshold is exemplified by people with sickle cell trait, who are carriers with only one mutation and are typically asymptomatic. These people generally have about 60% normal hemoglobin and only 40% HBS. The recently approved gene therapies for sickle cell disease, though clearly providing significant benefits to patients, do not achieve this threshold. With base editing, we are aiming for a deeper correction of the hemoglobin profile that is at least on par with or even better than that of a typical person with sickle cell trait. HBS also has the additional biochemical benefit of being anti-sickling, which may provide additional protection. In preclinical models, BEAM 101 achieved these goals, potently inducing HBS to more than 60% and proportionally reducing sickle HBS to less than 40% without the need to make double-stranded DNA breaks. Today we are reporting the first data from our ongoing clinical trial of BEAM 101 in patients with sickle cell disease that validate our preclinical findings and support our goals for this program. Let me now turn the call over to Amy to review the BEACON trial and the initial clinical data in our ASH abstract.

speaker
Amy

Thanks, John. Starting with the trial design, BEACON is a single-arm, open-label study evaluating the safety and efficacy of a single dose of BEAM 101 in patients with sickle cell disease and severe VOCs. The trial is enrolling adult patients 18 to 35 years old with sickle cell disease who have experienced four or more severe VOCs in the two years prior to screening. Patients are mobilized using Chlorexacor, after which botologous CD34-positive hematopoietic stem and progenitor cells are collected by leukophoresis and genetically modified with our adenine-based editor. Patients then receive myeloid lay-up conditioning with fuselphan, followed by a single infusion of BEAM 101. Key endpoints are outlined here on slide 16. As John highlighted, to date, we've exceeded enrollment projections with 35 patients having cleared screening and enrolled in the study. The data we'll review today are as of a July 2, 2024 data cut and include six patients in the efficacy analyses and four patients in the efficacy analyses. In our presentation at ASH, we'll share additional data with more patients and longer follow-up. Baseline demographics are shown on slide 17 and where it follows. Five of the six patients were beta-S, beta-S genotypes and one patient was beta-S, beta-0 genotypes. All were self-reported as black, African-American, 50% were female and ages ranged from 19 to 27 years. The BEAM 101 manufacturing process allowed for efficient dose production with all six patients requiring just one or two cycles of mobilization to achieve a dose with a mean of 1.5 cycles. As a reminder, minimizing the number of cycles of mobilization is a key goal for both patients and providers to reduce days in hospital and the overall time required to manufacture a dose. Safety data were captured for all six patients. BEAM 101 was considered generally well tolerated and demonstrated a safety profile consistent with myeloblades conditioning with B-sulfan and autologous metapoietic stem cell transplant. Of note, one patient died due to respiratory failure four months after their BEAM 101 infusion, which was determined by the investigator to be likely related to B-sulfan conditioning. B-sulfan is a cytotoxic drug used in a transplant setting and is known to be associated with significant side effects including lung injury and death. This is a complex case and the unfortunate outcome, while rare, has been reported previously with stem cell transplant. The event was determined to be unrelated to BEAM 101 by the investigator. The case was reviewed by both the Data Safety Monitoring Committee and the FDA. In all patients' doses, there was no grade B or higher adverse events or serious adverse events related to BEAM 101. As shown on slide 19, time to engraftment is for the four patients with a follow-up period of one month or more. Rapid neutrophil engraftment was observed for all patients after BEAM 101 treatment with a median of 17 days and a range of 15 to 19 days. Platelet engraftment was achieved at a median of 20 days with a range of 11 to 34 days. These data are similar to what is seen in patients undergoing allogeneic stem cell transplantations with unedited stem cells. Neutrophil engraftment is particularly important, as this is one of the key factors that determines the length of hospital stay in patients after undergoing a transplant. Minimizing time to neutrophil engraftment is another important goal of transplant therapy and sickle cell disease, because not only can it result in reduced hospital stays, but also to potentially decrease risk of developing opportunistic infections. On slide 20, we detailed total hemoglobin for the four patients included in the efficacy analyses, where patients had six, five, two, and one month of follow-up respectively. After treatment with BEAM 101, we observed an early and marked induction of HBS and a significant increase in total hemoglobin. The patient's total hemoglobin increased from the new baseline of 9.3 grams per deciliter to 17.9, 18.2, 11, and 11.8 grams per deciliter at the last time point. No symptoms or interventions were undertaken for the patients with mild elevated total hemoglobin. Notably, all four patients achieved greater than 60% HBS of non-transfused hemoglobin at month one and sustained its elevation at the last time point. The percent of HBS in non-transfused blood dropped to less than 40% in all four patients, which again was sustained through the last time point as of the data cutoff. Importantly, these data are consistent with our pre-clinical results and what's seen in individuals with sickle cell traits, whereas John mentioned, patients generally have 60% normal hemoglobin and 40% sickle globin. In addition, markers of hemolysis, including lack safety hydrogenase, indirect bilirubin, haptoglobin, and reticulocyte counts were seen to normalize or improve in all four patients. No VOCs were reported by investigators following B101 treatment. Collectively, these findings represent a deep correction of the hemoglobin profile of the blood after B101 treatment. In addition to our primary vegan clinical abstract, we have an additional abstract detailing exploratory biomarker assessments of red blood cells' hemoglobin expression, health, and function. As shown on slide 22, for the first two patients included in the analysis, 98% of red blood cells expressed HBS as early as month one, with near complete elimination of red blood cells expressing solely HBS post-treatment with B101. These HBS-only cells are the cells which would be most likely to sickle and cause pain crises and organ damage over time. Biomarker data also show that treatment with B101 restored red blood cell function across a range of parameters. As shown on slide 23, maximum sickling was significantly reduced for the first two patients treated with B101, below the levels associated with syphilis, trait blood samples. Other improvements in blood and function include decreased dense red blood cells, decreased hemolysis, and decreased red blood cell adhesion, all of which are associated with disease severity. In summary, we're encouraged by this emerging B101 clinical data, which we believe are consistent with our preclinical findings and demonstrate the potential for differentiation from other cell and gene therapies as outlined in the key takeaways on slide 24. Beam cell collection and manufacturing processes were efficient, resulting in just one to two mobilization cycles. B101 was generally well tolerated with a safety profile consistent with the known effects of myeloid-related conditioning and stem cell transplants. Neutrophil and grafted was rapid, with all patients in grafting in under 20 days. Both in grafting timing and cell collection efficiency contribute to shorter hospital stays and a faster path for treatment for patients. B101 effectively induced HBS to greater than 60%, with HBS meaningfully reduced to less than 40%, consistent with the profile of individuals with sickle cell traits. And finally, multiple biomarkers showed the near elimination of HBS-only cells and improved red blood cell health and function following B101 treatment. Taken together, we believe this initial data set demonstrates B101 has the potential to be best in class, one-time treatment for people living with sickle cell disease. We look forward to reporting data from a more recent data cut from our beacon trial in oral presentation at ASH on December 8, which will feature additional patients and longer follow-up. I'll now pass the call over to Pino to go through our initial escape data.

speaker
John

Thank you, Amy. Returning to our overall vision for bringing new options to patients with sickle cell disease, ESCAPE forms the foundation of a way to sickle cell disease strategy, which aims to provide the same transformative efficacy potential seen with way one, but with an alternative to genotoxic conditioning during the transplant process. This approach offers significant upside, including the potential to improve patient safety and overall treatment experience and become a compelling option not only for severe patients, but also for more moderate disease patients. As a result, we believe that such a product will expand the eligible patient population for gene editing therapies by up to fourfold. So why is conditioning so important? Conditioning is a critical component of a transplant. It is necessary to make space in a patient's body to receive the ex-vibral edit itself that needs to be grasped in a patient's bone marrow in order to be effective. The field of stem cell transplant has generated dramatic outcomes for many hematology patients, with upwards of 22,000 transplants now occurring in the U.S. annually. However, all such transplants still rely on chemotherapy, most commonly in bisulfone, to enable the replacement of blood cells. Bisulfone was first approved in the 1950s, and as Amy mentioned, is associated with both acute and chronic toxicity that include infertility, the potential for increased rates of malignancy, and in rare instances can be fatal. Improving upon that option represents the next frontier in hematology, and could bring the transformative impacts of transplant to many more patients with many more diseases. The escape technology has the potential to finally enable the vision of a non-genotoxic conditioning approach, thus bringing about the paradigm shift in transplant medicine for the first time in nearly 70 years. Our escape program consists of two investigational therapies, which we named BEAM-103 and BEAM-104, as part of our development candidate nomination announced today. BEAM-103 is our conditioning antibody, designed to bind unedited hematopoietic cells in the marrow and eliminate them. BEAM-104 is a multiplex-based edited cell product that includes two edits. The first is the same therapeutic edit as in BEAM-101 to elevate fetal hemoglobin. The second is an additional edit to introduce a mis-sensimization in the extracellular domain of CD1-17, a receptor expressed by hematopoietic stem and progenital cells that regulates the viral proliferation and differentiation of the cells. The CD1-17 edit does not alter CD1-17 biology, but only disrupts the binding of BEAM-103 to the receptor. This allows edited cells to escape the antibody with the goal of enabling ingraft and engross of edited cells and clearance of diseased cells. In the data shown on the right, you can see that in the presence of a mixed population of unedited and edited cells, the increasing levels of the antibody cause the cell population to shift to become completely edited cells. We have evaluated the system extensively in mice, but to establish a true post-concept, we wanted to conduct a comprehensive study in non-human primates. We are collaborating with multiple leading experts in the field, and this initial study was conducted by Dr. John Kiesdell of the NIH, a preeminent leader in autologous transplant and non-human primates models of transplant. The data to be presented by Dr. Kiesdell and Ash seek to answer two key fundamental questions. Can engrossment of hematopoietic stem cells be achieved without chemotherapy? And can a therapeutic level of phytoimmoglobin be achieved? As detailed on the right side of slide 30, the monkey autologous transplant process being conducted here is comparable to an ex vivo genetic product in humans, with the caveat that by necessity, various steps in the process have not been optimized to the same degree that we have done for humans. We mobilized CD34 cells from two rhesus macaque monkeys and edited them ex vivo, incorporating both the HPF edit and the CD117 escape edit. The animals were conditioned with BM103 CD117 antibody and then infused with the BM104 edited cell product. Subsequently, these animals received monthly antibody treatments after transplantation to maximize the competitive advantage of edited cells and continue suppression of unedited cells. The BM103 antibody was well tolerated both doses and no supportive care was necessary for the antibody conditioned animals. Importantly, they did not go through a period of mild ablation as is steady seen in chemotherapy conditions. Remarkably, we observed significant reduction of HPF at early time points post transplant. F cell levels rose to 61% in the periphery as early as eight weeks post transplant in one of the animals and stabilized at approximately 85%, a week 35 for both animals. Early induction of HPF was also observed with levels surpassing 50% in both animals. These unprecedented results established pre-cleaned work with concepts for conditioning with a CD117 antibody and non-keyed chemotherapy, leading to robust long-term ingratinine and high levels of HPF expression for ex vivo edited CD34 cells. If replicated in humans, these results would achieve a wave two vision of non-genotoxin conditioning for gene editing in hematology. Intriguingly, the lack of mild ablation also suggests the possibility that the transplant of escape edited CD34 cells could eventually become an outpatient procedure, further enhancing the access and scalability of these products for patients. On the back of these strong results, we're now accelerating the development of our escape technology towards the clinic. We're currently conducting additional NHB studies to explore antibody dosing regimens, dose response and chameleons, and we're on track to initiate Phase 1 enabling studies by the end of the year. Once complete, we plan to conduct a Phase 1 healthy volunteer study of the beam 103 antibody before moving into studies of both beam 103 and beam 104 in fecal cell disease and beta-steroid patients. As we now look forward to the development of this promising technology, I want to highlight the strong synergies between beam 101 and escape. With an identical edit and underlying base editing technology, today's beam 101 clinical data are also devising for escape. In each investment and advancement, we make manufacturing, clinical, regulatory, and commercial preparedness for beam 101 a direct applicability to accelerating and reducing the future success of escape. The two programs, therefore, form a single integrated franchise, which we believe can deliver successful improvements to patients with sickle cell disease. I'll now turn the call back over to John to wrap up.

speaker
John

Thanks, Pino. As you can see, we are very encouraged by these emerging data sets. First, for beam 101 in patients with sickle cell disease, we are so far achieving a potentially differentiated clinical profile using base editing, consistent with our preclinical data and comparable to sickle cell traits, while also potentially requiring fewer days in the hospital for both mobilization and engraftment. Second, with escape achieving robust preclinical proof of concept and now moving rapidly toward the clinic, we are opening up the potential for non-genotoxic conditioning in transplant, which would expand the initial beam 101 market to reach a broader group of patients with a less myeloablative profile that even has the potential to become an outpatient procedure for conditioning and transplant. And finally, these data sets support that base editing does appear to have significant advantages in predictability, efficiency, and lack of double strand breaks with strong translation from preclinical to clinical data, minimal impact on cell viability, and promising efficacy outcomes. Before I close, I'll provide a brief review of the clinical data on beam 201, which will be in a poster at ASH. Initial clinical data for beam 201, which is the first quadruplex edited allogeneic CAR T cell therapy candidate in clinical development, establishes clinical proof of concept for a high level of multiplex base editing. The safety profile of beam 201 was consistent with these patients' advanced underlying disease, as well as with lympho depletion and CAR T therapy. We also observed early evidence of clinical efficacy with two of three patients treated with beam 201, achieving a complete response, allowing them to pursue transplant, which is potentially curative. While not a priority program given our decision to focus on hematology and liver genetic diseases, we continue to seek a path forward for beam 201 with a partner and look forward to supporting its future advancement, as well as other potential applications of multiplex base editing in cell therapy. Wrapping up, as you've heard, 2024 has been an incredibly fruitful time at beam with broad based execution and validating data across our portfolio of base editing programs. We have a number of meaningful catalysts on the horizon, starting with updated data at ASH in December. Again, I'd like to thank the beam team for their continued hard work and dedication to our shared vision, the patients and physicians who participated in our clinical trials, and to each of you for your continued support of beam. With that, operator, please open the line for Q&A.

speaker
Operator

Thank you. At this time, we will conduct the question and answer session. As a reminder to ask a question, you will need to press star one one on your telephone and wait for your name to be announced. To withdraw your question, please press star one one again. All participants are limited to one question only. Please stand by while we compile the Q&A roster. Our first question comes from Jenna Wang with Barclays. Your line is now open.

speaker
Jenna Wang

Thank you. Really impressive update. I have so many questions since I can only ask one question. Maybe I ask less exciting question. That's the safety. One patient death, just a little bit puzzling. You know what? Why after four months and that patient die? And then, you know, why that could be due to the Bucillofan? If you can give a little bit more color there. Thank you.

speaker
John

Sure. Maybe I'll start and then I'll have Amy give a little color on the on the time course and what we know about Bucillofan. So thanks, Gina. So, yeah, you know, it's a very sad outcome. Of course, I think what it shows maybe at a high level is the very real risks of transplant and chemotherapy. You know, we're using Bucillofan in this case. We use the same protocol and dosing regimen of Bucillofan as others do in the field, obviously informed by world experts on our trial. But we know that chemotherapy and transplant do have significant toxicity and in rare cases can have mortality, something that the field continues to optimize. But it's but it's a real choice that patients have to think about. At the same time, I like to say that I think this also underscores the severity of severe sickle cell disease. You know, we've we've seen sickle cell survival rates improved to about 50 years on median here in the US. But that's median. You know, the most severe 10 percent are much sicker than that. And so, you know, the severity of the disease really is what makes that transplant potentially compelling option despite the risks. So it's importantly, as Amy will outline, you know, the case is consistent with our prior experience with Bucillofan and with transplant. So, you know, we don't see any change in the risk benefit profile of our agent or of the field based on this. Our goal with Beam 101 is ultimately to give a better option to patients and transplanters who are seeking transplant. That begins with the shift from aloe to auto, which is happening now. And of course, you know, with the data we're showing today, we believe that Beam 101 is essentially best in class profile out of the autologous therapies. So maybe with that preamble, I'll ask Amy to say just a little bit about what we know about Bucillofan and the time course of this kind of toxicity.

speaker
Amy

Sure. So it turns out Bucillofan is, as John mentioned, a chemotherapeutic incited toxic agent, and it is known to be associated with dose dependent pulmonary toxicity. So as you go up in higher doses, more toxicity and in some cases can actually be fatal. In general, myelo blade conditioning with agents such as Bucillofan can cause something that we refer to as the idiopathic pneumonia syndrome. This can occur in up to six percent of patients who have autologous transplant. And this idiopathic pneumonia syndrome really represents a spectrum of pulmonary diseases, including lung injury, respiratory failure that tend to start around day 20 or 30 post transplant and kind of manifest through about day 100. The rates, as I mentioned, are up to six percent, and these can often wind up with multi kind of multi-lobaropathies and a lung respiratory failure and in some cases, as I mentioned, be fatal. I think that the team at the site did an extensive workup. And usually what you'll do is rule out other potential contributing causes, which they did, such as infection or other types of etiologies for pulmonary dysfunction. And in the end, the timing of this dysfunction, as well as the extensive clinical workup, really point to the fact that this is consistent with what has been seen previously in Bucillofan, both in what is reported in the label, as well as the literature about stem cell transplantation complications with Bucillofan and other literature. Notably, the patient's blood was corrected and normalizing in line with what was seen in other patients. So while it is an unfortunate case, it is a known complication that myeloablative conditioning can have really kind of profound effects, even though it is required for a successful transplantation. And I think investigators take this into account when thinking about selecting patients who are appropriate for a risk benefit profile, as well as talking with their patients so that it's clear that the patients understand the risk benefit and that they're signing up for something that they understand what they're getting into. Thank you.

speaker
Operator

Thank you. Our next question comes from Yanen Zhu. Your line is now open.

speaker
Yanen Zhu

Great. Thanks for taking our questions and congrats on the data. Again, a very impressive HBF induction. I was wondering how would the higher HBF induction translate into additional clinical benefit compared with approved product and also other upcoming product in the pipeline? If you can shed some light, because I guess VOC has been, data has been pretty strong for the approved product. So wondering where could we see additional clinical benefit? Thank you.

speaker
John

Sure.

speaker
John

I'd like to cover this one. Yes. Hi, Yanen. Thank you very much for the question. As you can see, really, we do believe that this higher hemoglobin F is also associated with a concomitant decline of hemoglobin S to levels less than 40%. That 60 to 40 ratio is really the ratio that you typically see in sickle trait individuals who obviously do not have symptoms unless in very, you know, sort of severe conditions. So we do feel that that combination of 60 to 40 can be like a sickle trait and potentially even better since hemoglobin F is, you know, anti-sickling as opposed to hemoglobin A. So that should lead to a variety of deeper resolution. We share some biomarkers that show that the blood is function is normalized to the extent that we can measure it. We also show that we have almost completely eliminated cells that express hemoglobin S on its own. These are really the cells that potentially can cause sickling under some severe conditions. And so even though it is great to see a strong resolution of VOCs in the launch product so far, I think we have also potentially the opportunity to improve even upon that. And so the overall combination of the parameters that we have really for the first time reproduce the sickle trait that others have not yet done.

speaker
Yanen Zhu

Great. Thanks for the cover.

speaker
Operator

Thank you. Our next question comes from Dei Gonha with Stiefel. Your line is now open.

speaker
spk03

Hey, good morning, guys. Thanks for taking our questions. And I'll add my congrats on the initial data as well. Look forward to your 302 update next year. Circling back on the efficacy side, question for either John or Amy. Patients three and four, the female patients, just wondering if you can comment on the progress you're seeing there specifically on the fetal hemoglobin induction. And when you look at both across the board, it seems like month two seems to be sort of the start of a plateau, if you will, on the total hemoglobin. So just wondering how we should think about sort of the longer term efficacy for these two patients and specifically on the patient four side. Thanks very much.

speaker
John

Yeah, thanks again. So, you know, I think it's I think there's there's not much to see between the patients. There's going to be some variability. All of these patients have what I would consider to be a robust early induction of F. You know, the in patients three and four, it's also worth noting they receive their last transfusion closer to the month one time point, which means you have more transfused blood around. That has to clear before the marrow is going to turn on its endogenous production quite as strongly. So that's a subtle variable. I think ultimately we'll just wait for longer follow up and we should be able to compare these data sets.

speaker
spk03

Sounds good. Look forward to it.

speaker
John

Yep.

speaker
Operator

Thank you. Our next question comes from Eric Joseph with JP Morgan. Your line is now open.

speaker
Eric Joseph

Hi, good morning. Thanks for taking the questions. Just digging into the first two patients, one and two, that the total hemoglobin count is fairly high. At least, you know, at months five and six. So just wondering how we whether there's any concern about the total hemoglobin counts being sort of where they are, whether you sort of normalize or come back down with time. Any sort of concern, I guess, with long term follow up with persisting hemoglobin around that level. Yeah, thanks, Eric.

speaker
John

Amy.

speaker
Amy

Yeah, two patients, as you noted, have experienced mild elevations in hemoglobin. And importantly, there have been no clinical signs or symptoms from those patients or medical interventions required. These are really considered laboratory abnormalities at this point by the investigators and have not even been considered as adverse events. Importantly, as Pino alluded to recently with the elevated hemoglobin F to S ratio of 60 to 40. We feel that these patients are no longer patients who have sickle cell disease, but in fact, with editing their blood health and function have improved to what would be similar to that of a trait or a healthy person. And, you know, those include, as I already mentioned, the hemoglobin F to S ratio, the improvements or normalization and hemolysis, the decreased RBC sickling, RBC density and RBC adhesion. And for all those reasons, there has been really no concern by the investigators of these mild elevations seen to date. And as you mentioned, we'll continue to follow these. But at this point in time, this reflects really just a lab abnormality.

speaker
Eric Joseph

Got it. Appreciate it. Just one quick follow up, if I could, on the safety front. Any changes to either screening criteria or modifications to the conditioning regimen as a result of the unfortunate death attributed to the consultant?

speaker
Amy

Yeah, great question. There's been no change to our eligibility criteria. It was determined by the DMC and concurred with the FDA that the safety profile of the study had not changed after this event. However, we already had in place what's called therapeutic drug monitoring for B-sulfan. And that type of therapeutic monitoring is often done when there's a narrow therapeutic window for a drug. This is typically done by all the various studies in gene editing, as well as investigators who use B-sulfan for conditioning. And just to note that the patient's B-sulfan level was within the target range that we were basically trying to obtain to try to ensure both conditioning was appropriately done, but at the same time trying to guarantee safety.

speaker
Eric Joseph

Thanks for taking the questions.

speaker
Operator

Thank you. Our next question comes from Costas Ballouris with BMO Capital Market. Your line is now open.

speaker
Pino

Good morning. Thanks for taking our question and congrats on the progress and the data here. One clarification and one question from us, please. I think you already kind of described that, but can you clarify whether you have observed any off-target editing or bystander editing in the patient who died? I know there is no clinical evidence for that, but this is a question that comes up from investors. And then a second question on commercialization of 101 and Escape. How are you thinking about the sequencing of commercializing these two products and potential cannibalization of 101 from Escape? Thank you.

speaker
John

Great. Thank you, Costas. So I'll have Pino answer the first question, then I'll do the second.

speaker
John

Hi, Costas. Thanks for the question. Yeah, we have not noted any off-target biology of concern in any of the studies that we've done. Specifically, we do not do off-target biology on every single drug product, but as part of our preclinical package, you do extensive off-target biology on several donors, including the adjustment in silicone of looking at different genomic background, which was the context of the SGAV advisory board conversation that added. And through none of that activity, there was any off-target biology of concern emerged.

speaker
John

Great. Yeah, and then on the market perspective, I think our plan has always been, we consider this a life cycle strategy across this franchise. So beginning with Beam 101, then leading to Escape, now Beam 103 and 104, and ultimately thinking about in vivo as well. So we see this as a progression. I think if Escape fully achieves its profile, which would be, you know, efficacy comparable to 101 or other gene therapies in the field, but without chemotherapy, I would expect that to overtake and replace 101 on the market. But of course, we'll have to see the profiles and consider that at the time. You know, in terms of the market progression, I think we've talked about this as well, and I had it in my slides. But, you know, we continue to believe that the market for these sort of wave one therapies, as we call them, is about one in 10 patients, really those patients who are severe enough to consider a transplant. And there, you know, our goal is to give transplanters a better option. It's quite clear that autologous will be preferred over allogeneic. There's already several hundred allogeneic transplants that occur every year in the US for sickle cell patients with severe disease. And that's after including the fact that most of those patients who might seek a transplant can't find a match. Okay, so I think that implies a certain market size that we expect will be there. And we believe with today's data, you know, assuming it holds up over time, we'll show that Beam 101 is the best in class option for patients in this first market. Once we can bring escape forward, of course, that really changes the game, because now you have, of course, eliminated a lot of the risks of transplant and chemotherapy. You've also expanded the addressable patient population so that many more patients who might not have been a good fit for transplant before now can come in. And as Pino said, we think that leads to an addressable population that's up to four times larger. So final point to make in terms of the staging of the programs is the one that Pino highlighted as well, which is the escape program is almost identical to Beam 101, plus one single guide RNA to get to the C-Kit CD117 edit, and of course the antibody. So from a regulatory preclinical package, the clinical trial sites and design, regulatory strategy and endpoints, and ultimately even commercial infrastructure, all of that is shared between the two programs, which will make for a much more efficient development program. And I think ultimately will accelerate what we can do with escape.

speaker
Pino

Thank you very much.

speaker
Operator

Thank you. The next question comes from Samantha with City. Your line is now open.

speaker
Pino

Hi, good morning and thank you for taking the question. So sort of expanding on that last question, you know, the NHP data that you shared today for escape, they look pretty encouraging on both engraftment and HVF induction. But, you know, given the safety advantage with avoiding chemotherapy, I'm just curious on your thoughts on the potential tradeoff for a slightly less efficacious profile on the tradeoff for the better safety profile. And then relatedly for Beam 103, the CD117 anybody, are there any safety concerns for targeting CD117 that we should be aware of?

speaker
John

Thank you. Yeah, maybe I'll have Pino answer the second question. I'll just highlight on the first question. I think, of course, if you have, you know, a safety advantage but lose some efficacy, then there's more of a debate to be had. I think what you see from the data that Pino shared is we're achieving fairly full efficacy with escape and then we get that safety advantage. So, you know, so far that looks quite compelling. Obviously, as I noted, it'll take some time to evolve, you know, the full product profile. But maybe I'll hand over to Pino to expand on that. I'm sorry. Could you repeat the second question just for a moment?

speaker
Pino

Yes, of course. I was just thinking about as you move Beam 103 into the Phase 1 Healthy Volunteer Study next year, are there any safety concerns of targeting 117 that we should be aware of?

speaker
John

Yeah, thanks for repeating the question. So there have been actually several studies already conducted with antibodies against CD117. Actually, Celldex was the latest company to reveal some of the data they're using anti-CD117 for the treatment of aortic aria. And basically what you see in those individuals is that you see a transient but mild neutropenia being the major sort of outcome that you'll see. And so really, these antibodies do not lead to myoblation, as you would see with chemotherapy. And that's why, as John mentioned earlier, it opens the possibility actually that this kind of treatment may even become in the future an outpatient treatment paradigm because they obviously do not run the risk of opportunistic infections due to neutropenia. So we think that it really did help the volunteers a very expeditious and efficient way of quickly getting to a PKPD understanding of the antibody. And then it gives us a more assured essentially dosing regimen for us to go into the sickle cell and beta-thalassemia patient without having to have extensive sort of treatment options tested during those trials.

speaker
Operator

Thank you. Thank you. Our next question comes from Sammy Corwin with William Blair. Your line is now open.

speaker
Sammy Corwin

Good morning. Congrats on the data and thank you for taking my question. Pino, you just mentioned this and I noticed on the slide that you plan on exploring the escape technology and beta-thalassemia in addition to sickle cell disease. I guess I was curious what kind of prompted that expansion. And as you're thinking about the clinical trials for the escape platform, are you thinking about running those in the US or would those likely be conducted ex-US? Thank you.

speaker
John

So a couple of things on there. Just so in terms of the beta-thalassemia consideration, it's really a fact that we think that escape essentially alters the risk benefit profile and in particular reduces the risk to the point that even in the beta-thalassemia patients, a transplant might be justified, particularly in the broader beta-thalassemia patient, which goes beyond the transfusion dependent thalassemia patients, which, as you know, is a relatively small number of patients. Obviously very sick, but we think that escape opens up the opportunity to treat even beyond TDT. And so that's fundamentally the main reason to consider that. And then in terms of the various places where we'll go, the healthy volunteers, we have not yet decided exactly where it's going to be in the US or ex-US. We will just be really efficiency and rapid exploration of that phase one is really what's going to guide us in the choice that we make.

speaker
Operator

Thank you. Our next question comes from Luca Izzi with RBC Capital. Your line is now open.

speaker
spk16

Oh, great. Thanks so much for taking my question. Maybe, John, big picture. I'm not sure. It feels to me that escape is becoming increasingly more important now, especially in the context of the deaths today. Kind of reminding us, you know, the risk associated would be so fast. In a scenario where escape is actually not game changing, are you still committed to commercialize B101 solo or would you be open to partner B101 or out-license it, similar to what Editas has recently communicated? And I'd call it there. I much appreciate it. Thanks so

speaker
John

much. Yeah, thanks, Luca. It's a great question. You know, I think as you noted, we're playing the long game here in hematology and we see a very exciting progression of technology that takes advantage of base editing, not to mention our now significant capabilities in CD34 manufacturing and these sorts of, you know, blood therapies to create a lot of impact for patients over time. And it is a progression that begins with 101 as a potentially best in class product for this wave one market leading to escape, which is no question, you know, incredibly exciting and would be a really revolutionary product in the conditioning field. Expanding us from sickle cells also include beta thalassemia, et cetera. And as I have noted before, I think a lot of the capabilities we build along the way there now adding the ability to change your blood system potentially without chemotherapy could lead to a lot of other places. Right. So we see a lot of growth opportunity here in hematology over the long term. That's why it's one of our two core pillars. So I think when it comes to partnering, I think we've always said that we have the luxury here of we don't have to partner for financial reasons. We would only partner strategically. And so the partnership would be considered if a party could help us reach more patients more quickly, then we could do ourselves. And then it would be something that we would we would consider to your hypothetical. I think if if some of the elements of that pillar were to start to change, you know, if we didn't have the escape technology, for instance, or it didn't work in some fundamental way, I do think that would change the long term outlook in in hematology. That might change the balance of our of our strategic thinking. But in the in the near term, I don't think it would change the value we have with with being one to one potentially help a lot of patients who need help. So I think the calculus would basically be the same. It would be this. These are products that I think can make a big impact for patients and generate sustainable revenue and market value. If there's a party out there who can help us do any of this better without getting in the way of what we need to build, you know, that's that's a conversation that will entertain. Otherwise, we're we're prepared and well financed to do this ourselves.

speaker
spk16

We're clear. Thanks so much.

speaker
Operator

Thank you. Our next question comes from Michael Yee with Jeffries. Your line is now open.

speaker
Michael Yee

Good morning. If I may, since this is an earnings call as well, right, there are some other pipeline developments. You did announce that you had completed

speaker
spk01

those in the first cohort in a T, which I think is a big achievement. Can you just remind us to what extent you believe that there would be material enough information to disclose? Now, what time point, given my understanding is the A.T. levels should be rising pretty quickly. And certainly based on today's data, I'm sure you have more confidence in the editing here in Vivo. So at what point would there be enough proof of concept for you to disclose and given you've already those three patients already? Thank you so much.

speaker
John

Thank you, Mike. Yeah, great to hear from you. So you're absolutely right. We're we have a lot going on in the portfolio. We're very excited about the progress on the liver side as well, as I noted in the in the Q results with Alpha one. Obviously, first cohort completed and now moving forward with that dose escalation. And, you know, it is true as a reminder to everybody, we were dosing beginning at a low dose, but a low dose that is nonetheless expected to have biological activity. That's that's important ethically. And then we will seek to understand the optimal biological range as we go. So we've guided to a twenty twenty five data release on that program. I feel confident in that guidance. I think when we will narrow that as we can, obviously, I think what we've always said is we would look to bring out data when there is a clear profile of the drug. And I think that I think clearly means at least multiple cohorts. You know, exactly how we define that will be TBD. But, you know, we'll be watching it closely. And as you know, this is a this is a program that does have the potential for early clinical proof of concept based on levels of Alpha one in a normal and alpha one going up based on the protein, hopefully going down. And then, of course, we'll be looking at safety in a phase one study. So stay tuned. But but that's certainly an update that we'll be looking forward to in twenty five.

speaker
Operator

Thank you. Our next question comes from Rick with cancer Fitzgerald. Your line is now open.

speaker
Rick

Hey, good morning. Congrats on the update and thanks for taking the question. I was just hoping to get a little more color on the expected piece of dosing and beacon. I believe you said there was thirty five patients enrolled in the study and eight patients to date. So if we can just get a little more detail on where we are for cell collection of the twenty seven patients who weren't just yet and the potential timeline for all of these patients to be those.

speaker
John

Yeah, thanks. Thanks, Rick. So so I think as you rightly noted that we're quite pleased with the enrollment. It's actually exceeded expectations at this point. Thirty five patients now full enrolled. That does not include additional patients who are in screening and consenting. So it's a pretty robust pipeline and moving quite quickly now, you know, as we had hoped. I think when we set up the clinical program that we did and and thanks to our team for driving it, you know, dosing is is now, you know, basically, as you know, it takes a long time to create the dose. At this point, we have doses rolling off the line fairly regularly, so there's going to be a big uptick in doses in the near future as that trial commences. As a reminder of the overall trial, we're looking for forty five total patients who will be dosed here. So clearly we're well on our way to that. Also, interestingly, you know, we've always designed this trial as a potential to be a registration trial and our best understanding of that package based on the benchmark set by the Excel program was thirty patients followed for about fifteen months to get their end point assessed. And so, you know, clearly in this thirty five patients, we've already got those patients moving. So, you know, the clock has started at this point as we as we execute on these doses and look to enable what could be a potential filing package for one on one.

speaker
Operator

Thank you. Our next question comes from the cheat child pay with Guggenheim. Your line is now open.

speaker
spk02

Hi, everyone. This is right for set on for debit. What are your human translational expectations from the escape data? Do you expect outperformance or underperformance relative to one on one and does having being one on one clinical data help both. Sir, your confidence in escapes clinical performance.

speaker
John

Yeah, you know, yeah, thank you very much for the question. We expect frankly equivalent, if not better performance in inhuman and that's driven by the sequence of the guy that we use is and the antibody being cross reactive actually between non human primates and human. So we obviously we are refining a little bit the treatment paradigm of the antibody so that we can optimize it even further. But, you know, I think it is non human primate data gives us tremendous confidence that we can move forward to the clinical studies. Thank

speaker
Operator

you. Our final question comes from money for horror with leaving partners. Your line is now open.

speaker
spk05

Thanks for taking the question. Guys, a quick follow up on Mike's question or a TD as we think about the market opportunity in this indication. This is obviously a fairly heterogeneous population. How should we think about the past forward both in terms of enrollment and clinical data and then ultimate sort of commercial opportunity between patients with a predominantly long phenotype and those with a liver phenotype and how will your enrollment strategy reflect the opportunity set across those.

speaker
John

Yeah, great question. Thank you. And thanks to everybody for your engagement today. So, you know, alpha one, it is a somewhat heterogeneous population. You have, of course, the majority of patients are primarily lung involved. A minority have primary liver involvement. Of course, there's a spectrum of patients who share both. You know, the beauty of being three or two is that it addresses both sides of that equation. So, you know, for every allele we had it, we are going to start secreting normal protein, which should benefit the lungs and be under normal regulation. And we're going to decrease the production of this toxic Z protein that is causing so much trouble deliver. So I think at the end of the day, we don't need to choose now in the trial itself. We're initially studying this in patients who are primarily really long just to make sure we have a clean profile given this is a liver delivered therapy. Then we will treat patients who have much more liver involvement. But our expectation based on preclinical data and our goal would be to deliver a single dose that is usable across the entire population and develop the drug across the entire population. So I think by the time we get to considering market potential, you know, ultimately all patients are in view here, both currently diagnosed and then continuing to identify additional patients who have that easy phenotype and are in really severe need of new therapeutic options.

speaker
spk05

Like, can I get in a quick follow up here? So it makes a lot of sense to me that the technology can address the underlying genetic cause of disease and therefore address the molecular genetics to drive all of these phenotypes. That makes a lot of sense to me, they'll biologically and clinically. But from a regulatory perspective, the time horizon approval endpoints for these two phenotypes aren't necessarily aligned. So if you give us a little bit of code how you think about how to get approved for treatment for liver mix long, etc. What that looks like a regulatory practical perspective.

speaker
John

Yeah, I understood. And I mean, look, I think our first job here is to deliver a hopefully compelling Phase 1 data set, right, which shows the kind of fundamental correction of the gene in the body for the first time. So that that's step one. And that, of course, that data opens the door to the conversation with the regulators for a lot of the different options here. You're right that formally a lung endpoint may have a certain set of requirements and characteristics that may be different than a liver endpoint. Of course, the RNA knockdown therapies have been exploring the liver pathway. We can learn from that. And so certainly for the different kinds of patients, we may explore both. At the same time across both of them, there's the opportunity to consider the use of just the biomarkers themselves and the protein deficiency, which defines this disease. As as endpoints and markers of benefit that we would be exploring as well. And that, of course, would be universally across patients. So, so I definitely grant your point. I think it's early days. There's a lot to work through. I think our first step is generate a compelling data set that will then drive the conversations with regulators and investigators on how to develop the

speaker
spk05

drug. All right, thank you.

speaker
Operator

This concludes the question and answer session. Thank you for your participation in today's conference. This does conclude the program. You may now disconnect.

Disclaimer

This conference call transcript was computer generated and almost certianly contains errors. This transcript is provided for information purposes only.EarningsCall, LLC makes no representation about the accuracy of the aforementioned transcript, and you are cautioned not to place undue reliance on the information provided by the transcript.

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